Embeddings / Vector Databases / RAG • Field Guide

GraphRAG: How Knowledge Graphs Improve RAG for Complex Enterprise Questions

Learn how GraphRAG combines knowledge graphs, embeddings and LLMs for local, global and multi-hop retrieval. Explore architecture, evaluation, cost and enterprise use cases.

 GraphRAG / Knowledge Graph Retrieval / Enterprise Context Technical informational + enterprise architecture / implementation investigation

GraphRAG

Add structure when relationships matter

Use graph signals for relational, multi-hop and corpus-wide questions rather than routing every query through the graph.

Vector

Semantic similarity

Find passages and likely entities from meaning.

Graph

Explicit relationships

Traverse entities, edges, paths and communities.

Router

Choose retrieval mode

Basic, Local, Global or DRIFT based on the question.

Evidence boundary

Graph guides retrieval; sources support the answer

Keep source evidence, permissions and evaluation attached to the retrieval path.

Traditional RAG works well when the answer can be found in a few relevant passages.

But many enterprise questions are not passage-local.

Examples:

Which suppliers are indirectly connected to facilities affected by the new regulation?

What themes appear across thousands of complaints, and which products, regions and policies connect to those themes?

How are Customer A, Account B, Complaint C and Policy D related?

A vector database can retrieve semantically similar text. It does not automatically understand the network of relationships connecting facts across documents.

GraphRAG combines retrieval-augmented generation with graph-structured knowledge so an AI system can retrieve not only similar passages, but related entities, relationships, communities and evidence paths.

GraphRAG does not replace ordinary RAG. It extends retrieval for questions where relationships, multi-hop reasoning or corpus-wide structure matter.

Best fit

Relational, multi-hop and corpus-wide questions where connected facts matter.

Retrieval signals

Combine semantic similarity with entities, relationships, communities and source evidence.

Routing

Use Basic RAG, Local GraphRAG, Global Search or DRIFT according to query shape.

Governance

Apply permissions and provenance to nodes, edges, communities, summaries and retrieved evidence.

What is GraphRAG?

GraphRAG combines:

  • knowledge graphs,
  • entity relationships,
  • document evidence,
  • vector retrieval,
  • graph traversal,
  • large language models.

A knowledge graph represents entities and relationships explicitly. GraphRAG uses that structure to guide retrieval and generation.

GraphRAG vs traditional RAG

Dimension Traditional RAG GraphRAG
Primary retrieval unit Text chunks Entities, relationships, communities + text
Main signal Semantic similarity Semantic similarity + graph structure
Strongest query type Passage-level questions Relational, multi-hop and corpus-wide questions
Index construction Simpler More complex
Relationships Implicit in text Explicitly modeled
Global understanding Limited Can be explicitly supported
Typical cost Lower Potentially higher

GraphRAG solves a different class of retrieval problems.

Why vector RAG can fail on relational questions

If one document links Supplier A to Manufacturer B, another links Manufacturer B to Facility C, and a third says Facility C is affected by Regulation D, the answer requires a multi-hop relationship chain.

Graph traversal can provide another retrieval signal.

Indexing architecture

Documents
   ↓
Parsing
   ↓
Chunking
   ↓
Entity Extraction
   ↓
Relationship Extraction
   ↓
Entity Resolution
   ↓
Knowledge Graph
   ↓
Community Detection
   ↓
Community Summaries
   ↓
Embeddings / Search Indexes

Parse correctly

Poor PDF extraction, missing headings and broken tables reduce graph quality.

GraphRAG inherits standard RAG ingestion requirements.

Chunk the content

Chunking remains important because entity and relationship extraction depends on sufficient local context.

Poor boundaries can split relationships.

Extract entities and relationships

Common entities include people, companies, accounts, products, locations, policies, systems and events.

Relationships may include direction, dates, confidence, evidence and source.

Entity resolution

Enterprise data contains aliases and inconsistent names.

GraphRAG needs canonicalization so one business entity does not become several nodes.

Community detection

Large graphs contain clusters of strongly related entities.

Community summaries can support corpus-level questions.

Query modes

A GraphRAG system may support multiple retrieval strategies.

Best for entity-centered questions.

Best for corpus-wide themes and patterns.

Combines local retrieval with broader community context and iterative exploration.

A vector-RAG baseline for direct factual questions.

Many questions do not need graph traversal.

Query routing matters

A production system can route:

  • simple factual query → Basic RAG,
  • relationship query → Local GraphRAG,
  • corpus-wide query → Global Search,
  • complex exploratory query → DRIFT.

Do not use the most expensive retrieval mode for every question.

GraphRAG vs knowledge graph

A knowledge graph is a representation.

GraphRAG is:

Knowledge Graph + Retrieval + Source Evidence + LLM Generation

Bring-your-own graph

If the enterprise already has explicit customer, account, supplier, product or policy relationships, use those rather than reconstructing everything from text.

GraphRAG and vector databases work together

Vector Search
      ↓
Find likely entities
      ↓
Graph Traversal
      ↓
Expand relationships
      ↓
Retrieve source evidence
      ↓
LLM

Vectors and graphs solve different retrieval problems.

GraphRAG vs hybrid RAG

Hybrid RAG combines dense and sparse retrieval.

GraphRAG adds graph structure as another signal.

Enterprise retrieval can combine all three.

When GraphRAG is valuable

Strong candidates include:

  • regulatory intelligence,
  • financial intelligence,
  • customer intelligence,
  • supply chain,
  • cybersecurity,
  • enterprise knowledge.

GraphRAG becomes more useful as answers depend on connections rather than isolated passages.

When not to use GraphRAG

Traditional RAG may be better when the corpus is small, questions are direct, relationships add little value, data changes rapidly, cost must be low or latency is strict.

Structured databases may be better

Exact balances, counts and current structured facts may belong in SQL or APIs.

GraphRAG should augment authoritative systems, not replace them.

Graph construction quality

Measure entity precision/recall, relationship precision, duplicate rate, alias resolution, unsupported edges and source coverage.

A wrong edge can propagate errors.

Store evidence on every relationship

Attach source document, location, effective date and confidence where possible.

This supports explanation, audit and correction.

Temporal GraphRAG

Relationships change over time.

Represent valid_from and valid_to where appropriate.

Graph freshness

Measure source-change → graph-update → searchable delay.

Graph maintenance can be more complex than vector re-embedding.

Cost

Costs split into index-time extraction/summarization and query-time retrieval/generation.

Use cost-aware routing so expensive global search is used only when needed.

Evaluate against a strong RAG baseline

Compare GraphRAG with good chunking, embeddings, hybrid retrieval, metadata filters and reranking.

Adopt graph complexity only where it materially improves important queries.

Three levels of evaluation

  1. Graph quality.
  2. Retrieval quality.
  3. Answer quality.

Do not compress these into one score.

Query-type slices

Evaluate:

  • single fact,
  • multi-hop,
  • relationship,
  • global thematic,
  • historical,
  • cross-document.

GraphRAG may win only on specific slices.

Evaluate graph paths

For relational questions, measure whether the correct nodes and edges were retrieved.

Use node recall, edge recall, path precision and path completeness.

Source grounding

The graph should guide retrieval.

Authoritative source text should provide evidence.

Security

Graph structure itself can reveal sensitive relationships.

Apply permissions to nodes, edges, attributes, communities and summaries.

Permission-aware traversal

User / Agent Identity
       ↓
Authorized Graph View
       ↓
Graph Traversal
       ↓
Authorized Evidence
       ↓
LLM

Multitenancy

Avoid cross-tenant graph or community leakage.

GraphRAG for agents

Agents can route context requests among SQL, vector search, GraphRAG and APIs.

This is stronger than forcing every query through one retrieval technology.

Context engineering

GraphRAG is one context-selection mechanism.

It answers:

Which connected facts and relationships should be retrieved?

Domain ontology

Use entity and relationship types appropriate to the domain.

Start small and expand only when evaluation shows a need.

Enterprise reference architecture

ENTERPRISE SOURCES
      ↓
INGEST + PARSE
      ↓
CANONICAL ENTITIES
      ↓
TEXT/VECTOR + KNOWLEDGE GRAPH
      ↓
RETRIEVAL ROUTER
(Basic / Local / Global / DRIFT)
      ↓
RERANK
      ↓
SOURCE EVIDENCE
      ↓
LLM
      ↓
GROUNDED RESPONSE
      ↓
EVALUATION + FEEDBACK

Important GraphRAG KNOBS

  • chunk size,
  • overlap,
  • entity types,
  • relationship types,
  • extraction model,
  • extraction prompt,
  • merge threshold,
  • community algorithm,
  • community level,
  • summary model,
  • query route,
  • traversal depth,
  • candidate count,
  • embedding model,
  • reranking,
  • context limit.

Measure impact on correctness, recall, graph density, latency, tokens and cost.

Build incrementally

  1. Select a relationship-heavy use case.
  2. Build a strong RAG baseline.
  3. Define a small ontology.
  4. Extract the graph.
  5. Resolve entities.
  6. Evaluate graph quality.
  7. Add Local Search.
  8. Add Global/DRIFT only if needed.
  9. Add routing.
  10. Compare end-to-end outcomes.

Common mistakes

  1. Assuming GraphRAG replaces vector search.
  2. Using it for every question.
  3. Focusing on graph visualization rather than retrieval.
  4. Ignoring entity resolution.
  5. Storing relationships without evidence.
  6. Ignoring temporal validity.
  7. Allowing unrestricted traversal.
  8. Measuring only final answers.
  9. Rebuilding everything unnecessarily.
  10. Using default prompts without evaluation.

Where KREATE, KONTROLS and KNOBS fit

KREATE can transform documents, databases and APIs into governed entities, relationships and evidence.

KONTROLS can govern sources, sensitive attributes, relationship visibility, tenant isolation and agent access.

KNOBS can expose ontology, merge threshold, community level, retrieval mode and traversal depth as measurable variables.

Bottom line

GraphRAG extends RAG by giving retrieval an explicit model of entities and relationships.

Use:

  • SQL for structured facts,
  • Basic RAG for passage-level questions,
  • Hybrid RAG when lexical + semantic retrieval is enough,
  • GraphRAG when relationships and corpus structure matter.

Ask:

Which classes of questions improve enough with graph structure to justify the additional complexity?

Frequently asked questions

What is GraphRAG?

A retrieval-augmented architecture combining knowledge graphs, source documents, vector retrieval and LLMs so search can use explicit entities and relationships.

Is GraphRAG better than vector RAG?

Not universally. It is most useful for relational, multi-hop and corpus-wide questions; ordinary RAG is often simpler and cheaper for direct factual lookup.

Does GraphRAG still use embeddings?

Usually yes. Embeddings remain useful for semantic retrieval and entity matching while graph traversal adds structural signals.

Related DataKnobs guides

KREATE

Turn documents, databases and APIs into governed entities, relationships, evidence and reusable intelligence for vector retrieval, GraphRAG, assistants and agents.